Stem-loop ssl-MIR164b

Accession

MI0019342

Description

Salvia sclarea ssl-MIR164b precursor miRNA

Gene family

MIPF0000045; MIR164

Sequence

UGGAGAAGCAGGGCACGUGCAuuacuaacucaucucucagugccuauucuggcuacgggccggagucaguuauuucauguguccuccuucccca
(((.((((.((((((((((....(((.((((....(((.(((((......))).)))))...)))).))).....)))))))))).)))).)))

Structure

   A    C          -CAuu   a    aucu   a  -   ua 
UGG GAAG AGGGCACGUG     acu acuc    cuc gu gcc  u
||| |||| ||||||||||     ||| ||||    ||| || |||   
acc cuuc uccuguguac     uga ugag    ggg ca cgg  u
   c    c          uuuau   c    -gcc   -  u   uc 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssl-miR164b

• Accession: MIMAT0022508
• Description: Salvia sclarea ssl-miR164b mature miRNA
• Sequence: 1 - UGGAGAAGCAGGGCACGUGCA - 21
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19840835
   One-step identification of conserved miRNAs, their targets, potential transcription factors and effector genes of complete secondary metabolism pathways after 454 pyrosequencing of calyx cDNAs from the Labiate Salvia sclarea L
   "Legrand S, Valot N, Nicole F, Moja S, Baudino S, Jullien F, Magnard JL, Caissard JC, Legendre L"
   "Gene (2010) 450:55-62