miRBase entry: ssl-MIR169

Stem-loop ssl-MIR169


Accession
MI0019345
Description
Salvia sclarea ssl-MIR169 precursor miRNA


Sequence

UAGCCAAGGAUGACUUGCCUAuucuugcacgacaucccacucuauuuuuggauguuuuuguuugguuuaguaagcaaguucguccuugggua
((.((((((((((((((((((..((.(((.(((((((............)))))))..)))..))..)))...))))).)))))))))).))

Structure
  G          -     ---   uu  -u   -c       cacuc 
UA CCAAGGAUGA CUUGC   CUA  cu  gca  gacaucc     u
|| |||||||||| |||||   |||  ||  |||  |||||||      
au gguuccugcu gaacg   gau  gg  ugu  uuguagg     a
  g          u     aau   uu  uu   uu       uuuuu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ssl-miR169

Accession MIMAT0022511
Description Salvia sclarea ssl-miR169 mature miRNA
Sequence 1 - UAGCCAAGGAUGACUUGCCUA - 21
Evidence experimental
454 [1]

References

  1. PubMed ID: 19840835
    One-step identification of conserved miRNAs, their targets, potential transcription factors and effector genes of complete secondary metabolism pathways after 454 pyrosequencing of calyx cDNAs from the Labiate Salvia sclarea L
    "Legrand S, Valot N, Nicole F, Moja S, Baudino S, Jullien F, Magnard JL, Caissard JC, Legendre L"
    "Gene (2010) 450:55-62