miRBase entry: tur-mir-276

Stem-loop tur-mir-276


Accession
MI0019362
Description
Tetranychus urticae tur-mir-276 precursor miRNA
Gene family
MIPF0000124; mir-276


Sequence

guugguaucgcaAGCUCGGUGUGGAGUUUCUUACuguguuuuugaaccagaggUAGGAACUUCAUACCAUGCUCGuguuuacgaacu
(((.(((.(((.(((..((((((((((((((..((.((.........)).))..))))))))))))))..))).)))..))).))).

Structure
-   g   -u   a   UC              UA  g  uuu 
 guu gua  cgc AGC  GGUGUGGAGUUUCU  Cu ug   u
 ||| |||  ||| |||  ||||||||||||||  || ||   u
 caa cau  guG UCG  CCAUACUUCAAGGA  ga ac   g
u   g   uu   C   UA              Ug  g  caa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature tur-miR-276-5p

Accession MIMAT0023034
Description Tetranychus urticae tur-miR-276-5p mature miRNA
Sequence 13 - AGCUCGGUGUGGAGUUUCUUAC - 34
Evidence experimental
Illumina [1]

Mature tur-miR-276-3p

Accession MIMAT0023035
Description Tetranychus urticae tur-miR-276-3p mature miRNA
Sequence 54 - UAGGAACUUCAUACCAUGCUCG - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22113690
    The genome of Tetranychus urticae reveals herbivorous pest adaptations
    "Grbic M, Van Leeuwen T, Clark RM, Rombauts S, Rouze P, Grbic V, Osborne EJ, Dermauw W, Ngoc PC, Ortego F, Hernandez-Crespo P, Diaz I, Martinez M, Navajas M, Sucena E, Magalhaes S, Nagy L, Pace RM, Djuranovic S, Smagghe G, Iga M, Christiaens O, Veenstra JA"
    "Nature (2011) 479:487-492