Stem-loop tur-mir-745

Accession

MI0019369

Description

Tetranychus urticae tur-mir-745 precursor miRNA

Sequence

aucaaggaaggauuAGUCCGUCUCUGGGCUGCAAGGCuuaauugcaauuuauuuugaauagcaaugaaguugaaaugcCAGCUGCCCAGUGAAGGGCUGuuuacuccuugaa
.(((((((..((.((((((.((.((((((.((..(((...(((((.(((((...))))).)))))...........))).)).)))))).)).)))))).))..))))))).

Structure

a       ag  u      G  U      U  AA   --------uua     a     u 
 ucaagga  ga uAGUCC UC CUGGGC GC  GGC           auugc auuua  
 |||||||  || |||||| || |||||| ||  |||           ||||| ||||| u
 aguuccu  uu GUCGGG AG GACCCG CG  Ccg           uaacg uaagu  
a       ca  u      A  U      U  -A   uaaaguugaag     a     u 

Annotation confidence Not enough data

Genome context

Unknown

Mature tur-miR-745-5p

• Accession: MIMAT0023048
• Description: Tetranychus urticae tur-miR-745-5p mature miRNA
• Sequence: 15 - AGUCCGUCUCUGGGCUGCAAGGC - 37
• Evidence: experimental ; Illumina [1]

Mature tur-miR-745-3p

• Accession: MIMAT0023049
• Description: Tetranychus urticae tur-miR-745-3p mature miRNA
• Sequence: 79 - CAGCUGCCCAGUGAAGGGCUG - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22113690
   The genome of Tetranychus urticae reveals herbivorous pest adaptations
   "Grbic M, Van Leeuwen T, Clark RM, Rombauts S, Rouze P, Grbic V, Osborne EJ, Dermauw W, Ngoc PC, Ortego F, Hernandez-Crespo P, Diaz I, Martinez M, Navajas M, Sucena E, Magalhaes S, Nagy L, Pace RM, Djuranovic S, Smagghe G, Iga M, Christiaens O, Veenstra JA"
   "Nature (2011) 479:487-492