Stem-loop tur-mir-5736b

Accession

MI0019385

Description

Tetranychus urticae tur-mir-5736b precursor miRNA

Gene family

MIPF0001480; mir-5736

Sequence

auucaauuaauuuuaaauaccuuUGCGGAGUUGAUUGGGCGAAUgggucuuaaacaaucaaccaUCUGCCCAAUCGACUCCAAAAAAaguauuaaaaaagugaaa
.((((.....((((.(((((.(((..(((((((((((((((.((((...............)))).)))))))))))))))...))).))))).))))..)))).

Structure

a    auuaa    a     c   -GC               A    gucuua 
 uuca     uuuu aauac uuU   GGAGUUGAUUGGGCG AUgg      a
 ||||     |||| ||||| |||   ||||||||||||||| ||||      a
 aagu     aaaa uuaug AAA   CCUCAGCUAACCCGU Uacc      c
a    ---ga    a     a   AAA               C    aacuaa 

Annotation confidence Not enough data

Genome context

Unknown

Mature tur-miR-5736b-5p

• Accession: MIMAT0023078
• Description: Tetranychus urticae tur-miR-5736b-5p mature miRNA
• Sequence: 24 - UGCGGAGUUGAUUGGGCGAAU - 44
• Evidence: experimental ; Illumina [1]

Mature tur-miR-5736b-3p

• Accession: MIMAT0023079
• Description: Tetranychus urticae tur-miR-5736b-3p mature miRNA
• Sequence: 65 - UCUGCCCAAUCGACUCCAAAAAA - 87
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22113690
   The genome of Tetranychus urticae reveals herbivorous pest adaptations
   "Grbic M, Van Leeuwen T, Clark RM, Rombauts S, Rouze P, Grbic V, Osborne EJ, Dermauw W, Ngoc PC, Ortego F, Hernandez-Crespo P, Diaz I, Martinez M, Navajas M, Sucena E, Magalhaes S, Nagy L, Pace RM, Djuranovic S, Smagghe G, Iga M, Christiaens O, Veenstra JA"
   "Nature (2011) 479:487-492