Stem-loop tur-mir-133

Accession

MI0019386

Description

Tetranychus urticae tur-mir-133 precursor miRNA

Gene family

MIPF0000029; mir-133

Sequence

uugcuuucaucuuuAGUUGGUUGAAUCCGGGCCAAAUugauuuuguuuaagcacagaauuauuaaauaauauUUGGUCCCCUUCAACCAGCUGUagauaagcau
.(((((..((((.((((((((((((...((((((((((((((((((......))))))))).........)))))))))..)))))))))))).))))))))).

Structure

u     uc    u            UCC         ---------         uu 
 ugcuu  aucu uAGUUGGUUGAA   GGGCCAAAU         ugauuuugu  a
 |||||  |||| ||||||||||||   |||||||||         |||||||||   
 acgaa  uaga GUCGACCAACUU   CCUGGUUua         auuaagaca  a
u     --    U            -CC         uaauaaauu         cg 

Annotation confidence Not enough data

Genome context

Unknown

Mature tur-miR-133-5p

• Accession: MIMAT0023080
• Description: Tetranychus urticae tur-miR-133-5p mature miRNA
• Sequence: 15 - AGUUGGUUGAAUCCGGGCCAAAU - 37
• Evidence: experimental ; Illumina [1]

Mature tur-miR-133-3p

• Accession: MIMAT0023081
• Description: Tetranychus urticae tur-miR-133-3p mature miRNA
• Sequence: 73 - UUGGUCCCCUUCAACCAGCUGU - 94
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22113690
   The genome of Tetranychus urticae reveals herbivorous pest adaptations
   "Grbic M, Van Leeuwen T, Clark RM, Rombauts S, Rouze P, Grbic V, Osborne EJ, Dermauw W, Ngoc PC, Ortego F, Hernandez-Crespo P, Diaz I, Martinez M, Navajas M, Sucena E, Magalhaes S, Nagy L, Pace RM, Djuranovic S, Smagghe G, Iga M, Christiaens O, Veenstra JA"
   "Nature (2011) 479:487-492