Stem-loop tur-mir-124-2

Accession

MI0019392

Description

Tetranychus urticae tur-mir-124-2 precursor miRNA

Gene family

MIPF0000021; mir-124

Sequence

uacucuccGUGUUCACUGUUUGCCUUCAUGuagagcuuugauuuaucaUAAGGCACGCGGUGAAUGCCAagaguu
.(((((..(((((((((((.((((((.(((((((.......)))).))))))))).)))))))))))..))))).

Structure

u     cc           U      C   -    gc 
 acucu  GUGUUCACUGU UGCCUU AUG uaga  u
 |||||  ||||||||||| |||||| ||| ||||  u
 ugaga  CGUAAGUGGCG ACGGAA Uac auuu  u
u     AC           C      -   u    ag 

Annotation confidence Not enough data

Genome context

Unknown

Mature tur-miR-124-2-5p

• Accession: MIMAT0026457
• Description: Tetranychus urticae tur-miR-124-2-5p mature miRNA
• Sequence: 9 - GUGUUCACUGUUUGCCUUCAUG - 30
• Evidence: experimental ; Illumina [1]

Mature tur-miR-124-3p

• Accession: MIMAT0023089
• Description: Tetranychus urticae tur-miR-124-3p mature miRNA
• Sequence: 49 - UAAGGCACGCGGUGAAUGCCA - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22113690
   The genome of Tetranychus urticae reveals herbivorous pest adaptations
   "Grbic M, Van Leeuwen T, Clark RM, Rombauts S, Rouze P, Grbic V, Osborne EJ, Dermauw W, Ngoc PC, Ortego F, Hernandez-Crespo P, Diaz I, Martinez M, Navajas M, Sucena E, Magalhaes S, Nagy L, Pace RM, Djuranovic S, Smagghe G, Iga M, Christiaens O, Veenstra JA"
   "Nature (2011) 479:487-492