Stem-loop tur-mir-3931

Accession

MI0019393

Description

Tetranychus urticae tur-mir-3931 precursor miRNA

Gene family

MIPF0001585; mir-3931

Sequence

uuuuugcguggauugcaaugAUUUGUACCGAUUCAUUGAUAgguuagaagauugauuuacUACUUUGAGUCGGUACGAAUCAuaucauacaugcuuaaucaucguaaaau
.(((((((..(((((((((((((((((((((((((..(.(((((((......)))))))...)..))))))))))))))))))........)))..))))..))))))).

Structure

u       ug    --   --------                  UU --A       ga 
 uuuugcg  gauu  gca        augAUUUGUACCGAUUCA  G   UAgguua  a
 |||||||  ||||  |||        ||||||||||||||||||  |   |||||||   
 aaaaugc  cuaa  cgu        uACUAAGCAUGGCUGAGU  C   auuuagu  g
u       ua    uu   acauacua                  UU AUc       ua 

Annotation confidence Not enough data

Genome context

Unknown

Mature tur-miR-3931-5p

• Accession: MIMAT0023090
• Description: Tetranychus urticae tur-miR-3931-5p mature miRNA
• Sequence: 21 - AUUUGUACCGAUUCAUUGAUA - 41
• Evidence: experimental ; Illumina [1]

Mature tur-miR-3931-3p

• Accession: MIMAT0023091
• Description: Tetranychus urticae tur-miR-3931-3p mature miRNA
• Sequence: 61 - UACUUUGAGUCGGUACGAAUCA - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22113690
   The genome of Tetranychus urticae reveals herbivorous pest adaptations
   "Grbic M, Van Leeuwen T, Clark RM, Rombauts S, Rouze P, Grbic V, Osborne EJ, Dermauw W, Ngoc PC, Ortego F, Hernandez-Crespo P, Diaz I, Martinez M, Navajas M, Sucena E, Magalhaes S, Nagy L, Pace RM, Djuranovic S, Smagghe G, Iga M, Christiaens O, Veenstra JA"
   "Nature (2011) 479:487-492