miRBase entry: tur-mir-71-2

Stem-loop tur-mir-71-2


Accession
MI0019397
Description
Tetranychus urticae tur-mir-71-2 precursor miRNA
Gene family
MIPF0000278; mir-71


Sequence

cguuugauuuuuuggugUGAAAGACAUGGGUAGUGAGAUGuaacaaauuguaauuaauuuaacuaacaUCUCACUACUUUGUCUUUGGCGcuaauucaaaca
.((((((....(((((((.(((((((.((((((((((((((...((((((....)))))).....))))))))))))))))))))).))))))).)))))).

Structure
c      uuuu       G       U              --aac      u 
 guuuga    uuggugU AAAGACA GGGUAGUGAGAUGu     aaauug a
 ||||||    ||||||| ||||||| ||||||||||||||     ||||||  
 caaacu    aaucGCG UUUCUGU UUCAUCACUCUaca     uuuaau a
a      ---u       G       -              aucaa      u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature tur-miR-71-5p

Accession MIMAT0023040
Description Tetranychus urticae tur-miR-71-5p mature miRNA
Sequence 18 - UGAAAGACAUGGGUAGUGAGAUG - 40
Evidence experimental
Illumina [1]

Mature tur-miR-71-3p

Accession MIMAT0023041
Description Tetranychus urticae tur-miR-71-3p mature miRNA
Sequence 69 - UCUCACUACUUUGUCUUUGGCG - 90
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22113690
    The genome of Tetranychus urticae reveals herbivorous pest adaptations
    "Grbic M, Van Leeuwen T, Clark RM, Rombauts S, Rouze P, Grbic V, Osborne EJ, Dermauw W, Ngoc PC, Ortego F, Hernandez-Crespo P, Diaz I, Martinez M, Navajas M, Sucena E, Magalhaes S, Nagy L, Pace RM, Djuranovic S, Smagghe G, Iga M, Christiaens O, Veenstra JA"
    "Nature (2011) 479:487-492