Stem-loop tur-mir-12a

Accession

MI0019400

Description

Tetranychus urticae tur-mir-12a precursor miRNA

Gene family

MIPF0000181; mir-12

Sequence

aagugugauugccugUGAGUAUUACAUCAGGUACUgguugauuagauuuaauccaGUACUUAAUGUGAGACUCAUCgacaguuacacuc
.((((((((((.(.((((((.((((((.(((((((((((((......)))).))))))))).)))))).)))))).).)))))))))).

Structure

a          c u      A      C         -    uu 
 agugugauug c gUGAGU UUACAU AGGUACUgg uuga  a
 |||||||||| | |||||| |||||| ||||||||| ||||   
 ucacauugac g UACUCA AGUGUA UUCAUGacc aauu  g
c          a C      G      A         u    ua 

Annotation confidence Not enough data

Genome context

Unknown

Mature tur-miR-12a-5p

• Accession: MIMAT0023102
• Description: Tetranychus urticae tur-miR-12a-5p mature miRNA
• Sequence: 16 - UGAGUAUUACAUCAGGUACU - 35
• Evidence: experimental ; Illumina [1]

Mature tur-miR-12a-3p

• Accession: MIMAT0023103
• Description: Tetranychus urticae tur-miR-12a-3p mature miRNA
• Sequence: 56 - GUACUUAAUGUGAGACUCAUC - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22113690
   The genome of Tetranychus urticae reveals herbivorous pest adaptations
   "Grbic M, Van Leeuwen T, Clark RM, Rombauts S, Rouze P, Grbic V, Osborne EJ, Dermauw W, Ngoc PC, Ortego F, Hernandez-Crespo P, Diaz I, Martinez M, Navajas M, Sucena E, Magalhaes S, Nagy L, Pace RM, Djuranovic S, Smagghe G, Iga M, Christiaens O, Veenstra JA"
   "Nature (2011) 479:487-492