Stem-loop tur-mir-124-1

Accession

MI0019402

Description

Tetranychus urticae tur-mir-124-1 precursor miRNA

Gene family

MIPF0000021; mir-124

Sequence

ucauguuauugucauugccauacucucCGUGUUCACUGUGUAUGUCUUGauguuuccuuugauuaucaUAAGGCACGCGGUGAAUGCCAagaguugugguuaucuuauugauauggacauga
(((((((..(((((..((((((((((..(((((((((((((..(((((((((..((....)).)))))..)))))))))))))))))..)))).))))))........)))))..)))))))

Structure

       au     ------uu      -    cC             AU    --     uu  c 
ucauguu  uguca        gccaua cucu  GUGUUCACUGUGU  GUCU  UGaug  uc u
|||||||  |||||        |||||| ||||  |||||||||||||  ||||  |||||  ||  
aguacag  auagu        uggugu gaga  CGUAAGUGGCGCA  CGGA  acuau  ag u
       gu     uauucuau      u    AC             --    AU     -u  u 

Annotation confidence Not enough data

Genome context

Unknown

Mature tur-miR-124-3p

• Accession: MIMAT0023089
• Description: Tetranychus urticae tur-miR-124-3p mature miRNA
• Sequence: 69 - UAAGGCACGCGGUGAAUGCCA - 89
• Evidence: experimental ; Illumina [1]

Mature tur-miR-124-1-5p

• Accession: MIMAT0023088
• Description: Tetranychus urticae tur-miR-124-1-5p mature miRNA
• Sequence: 28 - CGUGUUCACUGUGUAUGUCUUG - 49
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22113690
   The genome of Tetranychus urticae reveals herbivorous pest adaptations
   "Grbic M, Van Leeuwen T, Clark RM, Rombauts S, Rouze P, Grbic V, Osborne EJ, Dermauw W, Ngoc PC, Ortego F, Hernandez-Crespo P, Diaz I, Martinez M, Navajas M, Sucena E, Magalhaes S, Nagy L, Pace RM, Djuranovic S, Smagghe G, Iga M, Christiaens O, Veenstra JA"
   "Nature (2011) 479:487-492