Stem-loop tur-mir-263b

Accession

MI0019404

Description

Tetranychus urticae tur-mir-263b precursor miRNA

Gene family

MIPF0000122; mir-263

Sequence

cguaaucuucaaccaaucugaaccuuuaucCUUGGCACUGGAAGAAUUCACCGuugauuaguuaaaaaacucGUGGGUUCUUGGGUGCCAAAGAcuaaggauaagaauucaagauuaua
.((((((((.......(((...((((..((.((((((((..((((((((((.(((............)))..)))))))))).)))))))).))..))))...)))....)))))))).

Structure

c        caaccaa   gaa    ua  C        GG          -C   gauua 
 guaaucuu       ucu   ccuu  uc UUGGCACU  AAGAAUUCAC  Guu     g
 ||||||||       |||   ||||  || ||||||||  ||||||||||  |||      
 uauuagaa       aga   ggaa  AG AACCGUGG  UUCUUGGGUG  caa     u
a        ---cuua   aua    uc  A        -G          cu   aaaau 

Annotation confidence Not enough data

Genome context

Unknown

Mature tur-miR-263b-5p

• Accession: MIMAT0023108
• Description: Tetranychus urticae tur-miR-263b-5p mature miRNA
• Sequence: 31 - CUUGGCACUGGAAGAAUUCACCG - 53
• Evidence: experimental ; Illumina [1]

Mature tur-miR-263b-3p

• Accession: MIMAT0023109
• Description: Tetranychus urticae tur-miR-263b-3p mature miRNA
• Sequence: 73 - GUGGGUUCUUGGGUGCCAAAGA - 94
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22113690
   The genome of Tetranychus urticae reveals herbivorous pest adaptations
   "Grbic M, Van Leeuwen T, Clark RM, Rombauts S, Rouze P, Grbic V, Osborne EJ, Dermauw W, Ngoc PC, Ortego F, Hernandez-Crespo P, Diaz I, Martinez M, Navajas M, Sucena E, Magalhaes S, Nagy L, Pace RM, Djuranovic S, Smagghe G, Iga M, Christiaens O, Veenstra JA"
   "Nature (2011) 479:487-492