Stem-loop tur-mir-263a

Accession

MI0019408

Description

Tetranychus urticae tur-mir-263a precursor miRNA

Gene family

MIPF0000122; mir-263

Sequence

aucuguuucucucUAUGGCACUGGAAGAAUUCACGgggacucaauguuauuccgUGGUUUCUCUAGUGCUGUGAagagcagcgggc
.((((((.((((.((((((((((((.(((.((((((((((.....)))..))))))).))))))))))))))).)))).)))))).

Structure

a      u    c            A   U       --   u 
 ucuguu cucu UAUGGCACUGGA GAA UCACGgg  gac c
 |||||| |||| |||||||||||| ||| |||||||  ||| a
 gggcga gaga GUGUCGUGAUCU CUU GGUgccu  uug a
c      c    A            -   U       ua   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature tur-miR-263a-5p

• Accession: MIMAT0023112
• Description: Tetranychus urticae tur-miR-263a-5p mature miRNA
• Sequence: 14 - UAUGGCACUGGAAGAAUUCACG - 35
• Evidence: experimental ; Illumina [1]

Mature tur-miR-263a-3p

• Accession: MIMAT0023113
• Description: Tetranychus urticae tur-miR-263a-3p mature miRNA
• Sequence: 55 - UGGUUUCUCUAGUGCUGUGA - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22113690
   The genome of Tetranychus urticae reveals herbivorous pest adaptations
   "Grbic M, Van Leeuwen T, Clark RM, Rombauts S, Rouze P, Grbic V, Osborne EJ, Dermauw W, Ngoc PC, Ortego F, Hernandez-Crespo P, Diaz I, Martinez M, Navajas M, Sucena E, Magalhaes S, Nagy L, Pace RM, Djuranovic S, Smagghe G, Iga M, Christiaens O, Veenstra JA"
   "Nature (2011) 479:487-492