Stem-loop tur-mir-305

Accession

MI0019409

Description

Tetranychus urticae tur-mir-305 precursor miRNA

Sequence

ggaagcuuguuaUUUGUACUUCAUCAGGUGCUCUGuguuauuuuuuauguuaugauguuucaGACAUCUGAAGAAGUACAUUUAucaaggcuuaaccg
(((((((((.((..((((((((.(((((((.((((...((((...........))))...))))))))))).))))))))..)).))).))))..)).

Structure

-  --    -   u  UU        A       C    ugu    uuuu 
 gg  aagc uug ua  UGUACUUC UCAGGUG UCUG   uauu    a
 ||  |||| ||| ||  |||||||| ||||||| ||||   ||||    u
 cc  uucg aac AU  ACAUGAAG AGUCUAC AGac   guag    g
g  aa    g   u  UU        A       -    uuu    uauu 

Annotation confidence Not enough data

Genome context

Unknown

Mature tur-miR-305-5p

• Accession: MIMAT0023114
• Description: Tetranychus urticae tur-miR-305-5p mature miRNA
• Sequence: 13 - UUUGUACUUCAUCAGGUGCUCUG - 35
• Evidence: experimental ; Illumina [1]

Mature tur-miR-305-3p

• Accession: MIMAT0023115
• Description: Tetranychus urticae tur-miR-305-3p mature miRNA
• Sequence: 63 - GACAUCUGAAGAAGUACAUUUA - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22113690
   The genome of Tetranychus urticae reveals herbivorous pest adaptations
   "Grbic M, Van Leeuwen T, Clark RM, Rombauts S, Rouze P, Grbic V, Osborne EJ, Dermauw W, Ngoc PC, Ortego F, Hernandez-Crespo P, Diaz I, Martinez M, Navajas M, Sucena E, Magalhaes S, Nagy L, Pace RM, Djuranovic S, Smagghe G, Iga M, Christiaens O, Veenstra JA"
   "Nature (2011) 479:487-492