Stem-loop sequence ola-let-7b-1

AccessionMI0019431 (change log)
DescriptionOryzias latipes let-7b-1 stem-loop
Gene family MIPF0000002; let-7
Literature search

2 open access papers mention ola-let-7b-1
(14 sentences)

Stem-loop 
   cgua     u                     ucaggguaguuauu 
5'     cgggg gagguaguagguugugugguu              u
       ||||| |||||||||||||||||||||              u
3'     guccc uuccgucauccaacauaucaa              g
   -gaa     -                     uagaggacuaaccc
Get sequence
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (MEDAKA1) Overlapping transcripts
6: 6147325-6147415 [+]
sense
ENSORLT00000026190 ; ola-let-7b-1-201; exon 1
Clustered miRNAs
< 10kb from ola-let-7b-1
ola-let-7a-16: 6146863-6146961 [+]
ola-let-7b-16: 6147325-6147415 [+]
Database links

Mature sequence ola-let-7b

Accession MIMAT0022551
Sequence

10 -  

ugagguaguagguuguguggu

 - 30

Get sequence
Evidence experimental; SOLiD [1]

References

1
PMID:21143817 "Discovery and characterization of medaka miRNA genes by next generation sequencing platform" Li SC, Chan WC, Ho MR, Tsai KW, Hu LY, Lai CH, Hsu CN, Hwang PP, Lin WC BMC Genomics. 11 Suppl 4:S8(2010).