miRBase entry: ola-mir-135a-2

Stem-loop ola-mir-135a-2


Accession
MI0019451
Description
Oryzias latipes ola-mir-135a-2 precursor miRNA
Gene family
MIPF0000028; mir-135


Sequence

uaauaaaccacacaugcaucuUAUGGCUUUCUAUUCCUAUGUgaguucuaaacacaucauguaggguuuaaagccaucggauacacaguggacgauca
.......((((...((.((((.((((((((....((((((((((((.......)).))))))))))...)))))))).)))).))..)))).......

Structure
uaauaaa    aca  c    U        CUAU          -  uc 
       ccac   ug aucu AUGGCUUU    UCCUAUGUga gu  u
       ||||   || |||| ||||||||    |||||||||| ||  a
       ggug   ac uagg uaccgaaa    gggauguacu ca  a
acuagca    -ac  a    c        -uuu          a  ca 


Annotation confidence Not enough data
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Genome context
7: 20955695-20955792 [-]

Database links

Mature ola-miR-135a

Accession MIMAT0022547
Description Oryzias latipes ola-miR-135a mature miRNA
Sequence 22 - UAUGGCUUUCUAUUCCUAUGU - 42
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 21143817
    Discovery and characterization of medaka miRNA genes by next generation sequencing platform
    Li SC, Chan WC, Ho MR, Tsai KW, Hu LY, Lai CH, Hsu CN, Hwang PP, Lin WC
    BMC Genomics (2010) 11:S8