miRBase entry: ola-mir-137

Stem-loop ola-mir-137


Accession
MI0019457
Description
Oryzias latipes ola-mir-137 precursor miRNA
Gene family
MIPF0000106; mir-137


Sequence

cacuugcucccgucucgaccacggguauucuuggguugauaauacagaugucgauguuaUUGCUUGAGAAUACGCGUAGCUgagcggaagccauug
.....(((.(((.((((.(.(((.((((((((((((.(((((((..(....)..))))))))))))))))))).))).).))))))).))).....

Structure
cacuu   c   u    a c   g            u       ca a 
     gcu ccg cucg c acg guauucuugggu gauaaua  g u
     ||| ||| |||| | ||| |||||||||||| |||||||  |  
     cga ggc gagU G UGC CAUAAGAGUUCG UUauugu  c g
guuac   a   -    C A   G            -       ag u 


Annotation confidence Not enough data
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Genome context
8: 22468612-22468707 [+]

Database links

Mature ola-miR-137

Accession MIMAT0022577
Description Oryzias latipes ola-miR-137 mature miRNA
Sequence 60 - UUGCUUGAGAAUACGCGUAGCU - 81
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 21143817
    Discovery and characterization of medaka miRNA genes by next generation sequencing platform
    Li SC, Chan WC, Ho MR, Tsai KW, Hu LY, Lai CH, Hsu CN, Hwang PP, Lin WC
    BMC Genomics (2010) 11:S8