Stem-loop ola-mir-150

Accession

MI0019463

Description

Oryzias latipes ola-mir-150 precursor miRNA

Literature search

1 open access papers mention ola-mir-150
(1 sentences)

Sequence

guguucucaggagccggacgcauuucugcagaucuuccuccaaaggucucgguccggucACUCCCAAUCCUUGUACCAGUguccugcuaugguggcgcuggacagguuu
.........(((((((((((((....)))(((((((......)))))))..))))))...))))................(((((((((...)))))..))))......

Structure

------------------------------------guguucuca    ---      gcauuucugcagauc 
                                             ggag   ccggac               u
                                             ||||   ||||||                
                                             CCUC   ggccug               u
uuuggacaggucgcggugguaucguccugUGACCAUGUUCCUAAC    Acu      gcucuggaaaccucc 

Annotation confidence Not enough data

Genome context

8: 25382196-25382304 [-]

Mature ola-miR-150

• Accession: MIMAT0022584
• Description: Oryzias latipes ola-miR-150 mature miRNA
• Sequence: 60 - ACUCCCAAUCCUUGUACCAGU - 80
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 21143817
   Discovery and characterization of medaka miRNA genes by next generation sequencing platform
   Li SC, Chan WC, Ho MR, Tsai KW, Hu LY, Lai CH, Hsu CN, Hwang PP, Lin WC
   BMC Genomics (2010) 11:S8