miRBase entry: ola-mir-458

Stem-loop ola-mir-458


Accession
MI0019477
Description
Oryzias latipes ola-mir-458 precursor miRNA
Gene family
MIPF0000179; mir-458


Sequence

cuccaccggcugcagacuccagcgccauuuucagagcuauaagugugaagugaugAUAGCUCUUUCAAUGGUACUGCaguaagcauucacaugag
(((....((.(((..(((.(((.((((((...((((((((..((........)).))))))))...)))))).))).)))..))).))....)))

Structure
   cacc  c   ag   c   c      uuc        aa  gug 
cuc    gg ugc  acu cag gccauu   agagcuau  gu   a
|||    || |||  ||| ||| ||||||   ||||||||  ||    
gag    cu acg  uga GUC UGGUAA   UCUCGAUA  ua   a
   uaca  u   aa   C   A      CUU        -g  gug 


Annotation confidence Not enough data
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Genome context
10: 25327849-25327943 [-]

Database links

Mature ola-miR-458

Accession MIMAT0022595
Description Oryzias latipes ola-miR-458 mature miRNA
Sequence 56 - AUAGCUCUUUCAAUGGUACUGC - 77
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 21143817
    Discovery and characterization of medaka miRNA genes by next generation sequencing platform
    Li SC, Chan WC, Ho MR, Tsai KW, Hu LY, Lai CH, Hsu CN, Hwang PP, Lin WC
    BMC Genomics (2010) 11:S8