miRBase entry: ola-mir-31

Stem-loop ola-mir-31


Accession
MI0019530
Description
Oryzias latipes ola-mir-31 precursor miRNA
Gene family
MIPF0000064; mir-31


Sequence

ugauuuucauauuggguccugaaugaGGGCAAGAUGUUGGCAUAGCUGUugaagugaaggcucugcuaugccagugacuugccauccuucacuucccuguugcagcca
.............(((...((((.((.((((((...((((((((((.(((........)))...))))))))))...)))))).)).))))...)))...........

Structure
ugauuuucauauu   ucc    u  G      AUG          --U   gaa 
             ggg   ugaa ga GGCAAG   UUGGCAUAGC   GUu   g
             |||   |||| || ||||||   ||||||||||   |||    
             ccc   acuu cu ccguuc   gaccguaucg   cgg   u
--accgacguugu   uuc    c  a      agu          ucu   aag 


Annotation confidence Not enough data
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Genome context
18: 10684065-10684172 [-]

Database links

Mature ola-miR-31

Accession MIMAT0022649
Description Oryzias latipes ola-miR-31 mature miRNA
Sequence 27 - GGGCAAGAUGUUGGCAUAGCUGU - 49
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 21143817
    Discovery and characterization of medaka miRNA genes by next generation sequencing platform
    Li SC, Chan WC, Ho MR, Tsai KW, Hu LY, Lai CH, Hsu CN, Hwang PP, Lin WC
    BMC Genomics (2010) 11:S8