Stem-loop ola-mir-124-3

Accession

MI0019533

Description

Oryzias latipes ola-mir-124-3 precursor miRNA

Gene family

MIPF0000021; mir-124

Literature search

3 open access papers mention ola-mir-124-3
(7 sentences)

Sequence

agcggguugugucucucCGUGUUCACAGCGGACCUUgauuuaaugucuuacaauUAAGGCACGCGGUGAAUGCCAagagaugauccuccau
...(((((..((((((..((((((((.(((..(((((((((((....))).))))))))..))).))))))))..))))))))))).....

Structure

--agc     gu      cC        A   GA        -   u 
     ggguu  gucucu  GUGUUCAC GCG  CCUUgauu uaa g
     |||||  ||||||  |||||||| |||  |||||||| |||  
     ccuag  uagaga  CGUAAGUG CGC  GGAAUuaa auu u
uaccu     --      AC        G   AC        c   c 

Annotation confidence Not enough data

Genome context

20: 15452264-15452354 [-]

Mature ola-miR-124-5p

• Accession: MIMAT0022689
• Description: Oryzias latipes ola-miR-124-5p mature miRNA
• Sequence: 18 - CGUGUUCACAGCGGACCUU - 36
• Evidence: experimental ; SOLiD [1]

Mature ola-miR-124-3p

• Accession: MIMAT0022573
• Description: Oryzias latipes ola-miR-124-3p mature miRNA
• Sequence: 55 - UAAGGCACGCGGUGAAUGCCA - 75
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 21143817
   Discovery and characterization of medaka miRNA genes by next generation sequencing platform
   Li SC, Chan WC, Ho MR, Tsai KW, Hu LY, Lai CH, Hsu CN, Hwang PP, Lin WC
   BMC Genomics (2010) 11:S8