miRBase entry: ola-mir-181a-2

Stem-loop ola-mir-181a-2


Accession
MI0019560
Description
Oryzias latipes ola-mir-181a-2 precursor miRNA
Gene family
MIPF0000007; mir-181

Literature search
2 open access papers mention ola-mir-181a-2
(108 sentences)

Sequence

ucaaggAACAUUCAACGCUGUCGGUgaguuugugacaaaggagaaaccaucgagcguugaguguacccga
....((.(((((((((((..((((((.((((.(........).))))))))))))))))))))).))...

Structure
ucaa  A           UG      a    g gac 
    gg ACAUUCAACGC  UCGGUg guuu u   a
    || |||||||||||  |||||| |||| |    
    cc ugugaguugcg  agcuac caaa a   a
-agc  a           --      -    g gga 


Annotation confidence Not enough data
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Genome context
ultracontig105: 3834-3903 [+]

Database links

Mature ola-miR-181a-5p

Accession MIMAT0022586
Description Oryzias latipes ola-miR-181a-5p mature miRNA
Sequence 7 - AACAUUCAACGCUGUCGGU - 25
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 21143817
    Discovery and characterization of medaka miRNA genes by next generation sequencing platform
    Li SC, Chan WC, Ho MR, Tsai KW, Hu LY, Lai CH, Hsu CN, Hwang PP, Lin WC
    BMC Genomics (2010) 11:S8