Stem-loop vun-MIR319b

Accession

MI0019567

Description

Vigna unguiculata vun-MIR319b precursor miRNA

Gene family

MIPF0000010; MIR159

Literature search

2 open access papers mention vun-MIR319b
(2 sentences)

Sequence

uugggaaggaaagagagugaaggagcuucccucagcccauucauggacacagaauaagauuggguugcaaaauuaaccacuaauugauucacacaauaguauugaguuagggugaugcuguuuuugcugugauaugauugugugaaugaaguggugcauauauauugugacccucuuucucugugCUUGGACUGAAGGGAGCUCCUucuuucuguugccuccu
..((((.((.((.((((.((((((((((((.((((.(((.....((.((((((..((((..(((((((((.((....(((((.((.(((((((((((.(((((.....(.(((((........))))).)))))).))))))))))).)).))))).....)).)))))))))))))..))))))))))).)))).)))))))))))).)))).)).))))))

Structure

uu    a  a  g    u            c    c   uucau  a      au    uu         a  -uaac     a  g           a     gaguu g     ugc 
  ggga gg aa agag gaaggagcuucc ucag cca     gg cacaga  aaga  ggguugcaa au     cacua uu auucacacaau guauu     a gguga   u
  |||| || || |||| |||||||||||| |||| |||     || ||||||  ||||  ||||||||| ||     ||||| || ||||||||||| |||||     | |||||    
  uccu cc uu ucuu cuUCCUCGAGGG AGUC GGU     UC gugucu  uucu  cccaguguu ua     guggu aa uaaguguguua uauag     u ucguu   g
--    -  g  g    u            A    A   -----  -      cu    --         a  uauac     g  g           g     ----- g     uuu 

Annotation confidence Not enough data

Genome context

Unknown

Mature vun-miR319b

• Accession: MIMAT0022754
• Description: Vigna unguiculata vun-miR319b mature miRNA
• Sequence: 186 - CUUGGACUGAAGGGAGCUCCU - 206
• Evidence: experimental ; cloned [1]

References

1. Identification and validation of conserved microRNAs along with their differential expression in roots of Vigna unguiculata grown under salt stress
   "Paul S, Kundu A, Pal A"
   "Plant Cell Tissue Organ Culture. (2011) 105:233-242