Stem-loop vun-MIR172

Accession

MI0019573

Description

Vigna unguiculata vun-MIR172 precursor miRNA

Gene family

MIPF0000035; MIR172

Sequence

uucacagucguuguuugcggauguagcaucaucaagauucacaugcaaacgaagguggaugggacugugaugcaaucuaaccgcucgucuuuuugaugugAGAAUCUUGAUGAUGCUGCAUcagccauaaacgacuuuaa
.....(((((((..(.((.(((((((((((((((((((((((((.(((((((..((((...(((.(((...))).)))..))))))))....)))))))))..))))))))))))))))))).)).)..)))))))....

Structure

uucac       gu u  g                   --      g   ----    ag    aug   c   g 
     agucguu  u gc gauguagcaucaucaagau  ucacau caa    acga  gugg   gga ugu  
     |||||||  | || |||||||||||||||||||  |||||| |||    ||||  ||||   ||| ||| a
     ucagcaa  a cg cUACGUCGUAGUAGUUCUA  Agugua guu    ugcu  cgcc   ucu acg  
-aauu       au c  a                   AG      -   uuuc    --    -aa   a   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature vun-miR172

• Accession: MIMAT0022760
• Description: Vigna unguiculata vun-miR172 mature miRNA
• Sequence: 101 - AGAAUCUUGAUGAUGCUGCAU - 121
• Evidence: not_experimental

References

1. Identification and validation of conserved microRNAs along with their differential expression in roots of Vigna unguiculata grown under salt stress
   "Paul S, Kundu A, Pal A"
   "Plant Cell Tissue Organ Culture. (2011) 105:233-242