miRBase entry: mtr-MIR5752a

Stem-loop mtr-MIR5752a


Accession
MI0019678
Description
Medicago truncatula mtr-MIR5752a precursor miRNA
Gene family
MIPF0001414; MIR5752


Sequence

aauaucaaguaaucaucuguagauuugugcuaagaccaaauaauguguugaaaacaauguguugagaguaucaCAUUGUUUGGUUUAGUACAAAuuuauggaugguuaucaacaucaac
........((((((((((((((((((((((((.((((((((((((((.((..((((...)))).....)).))))))))))))))))))))))))))))))))))))))..........

Structure
--aauaucaa                        a              u  ---aa    a 
          guaaucaucuguagauuugugcua gaccaaauaaugug ug     aaca  
          |||||||||||||||||||||||| |||||||||||||| ||     |||| u
          uauugguagguauuuAAACAUGAU UUGGUUUGUUACac au     uugu  
caacuacaac                        -              u  gagag    g 


Annotation confidence Not enough data
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Genome context
chr4: 818809-818927 [-]

Database links

Mature mtr-miR5752a

Accession MIMAT0023133
Description Medicago truncatula mtr-miR5752a mature miRNA
Sequence 74 - CAUUGUUUGGUUUAGUACAAA - 94
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22156213
    MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
    "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
    "Genes Dev (2011) 25:2540-2553