miRBase entry: osa-MIR5792

Stem-loop osa-MIR5792


Accession
MI0019804
Description
Oryza sativa osa-MIR5792 precursor miRNA

Literature search
3 open access papers mention osa-MIR5792
(4 sentences)

Sequence

cgucGAUGACAGCGGUGGUUCGGACAUCuucggcuuuguaccugcuuggcuugauggcaucaucguucuuaucgaug
(((((((((.(((((((((.....((((...((((..((....))..)))).))))..))))))))).)))))))))

Structure
         C         UCGGA    uuc    uu  a 
cgucGAUGA AGCGGUGGU     CAUC   ggcu  gu c
||||||||| |||||||||     ||||   ||||  ||  
guagcuauu uugcuacua     guag   ucgg  cg c
         c         ---cg    --u    uu  u 


Annotation confidence Not enough data
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Genome context
Chr10: 11842884-11842960 [+]

Database links

Mature osa-miR5792

Accession MIMAT0023259
Description Oryza sativa osa-miR5792 mature miRNA
Sequence 5 - GAUGACAGCGGUGGUUCGGACAUC - 28
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22158467
    Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage
    "Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ"
    "Plant Cell (2011) 23:4185-4207