miRBase entry: osa-MIR5803

Stem-loop osa-MIR5803


Accession
MI0019819
Description
Oryza sativa osa-MIR5803 precursor miRNA


Sequence

4 reads, 4 reads per million, 2 experiments
uaauguuacuACCACUGUAGACGCUACGUGUGAGauaauaggaggauauaacccacguaucagcgccuguaaugauagugacauuau
(((((((((((.((.(((((.(((((((((.(..(((.........)))..).)))))...)))).))))).)).))))))))))).

Structure
-           C  C     A    ---     U AG   aua 
 uaauguuacuA CA UGUAG CGCU   ACGUG G  aua   g
 ||||||||||| || ||||| ||||   ||||| |  |||   g
 auuacagugau gu auguc gcga   ugcac c  uau   a
u           a  a     c    cua     c aa   agg 


Annotation confidence Not enough data
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Genome context
Chr4: 30231534-30231620 [+]

Database links

Mature osa-miR5803

Accession MIMAT0023274
Description Oryza sativa osa-miR5803 mature miRNA
Sequence 11 - ACCACUGUAGACGCUACGUGUGAG - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22158467
    Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage
    "Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ"
    "Plant Cell (2011) 23:4185-4207