miRBase entry: osa-MIR5814

Stem-loop osa-MIR5814


Accession
MI0019831
Description
Oryza sativa osa-MIR5814 precursor miRNA


Sequence

25 reads, 21 reads per million, 2 experiments
ggcuacugguAAUCAAGUUAGGAACCAUGCAAGUuguuuaugaguugugcccucugugccuagcgccauagaugacuugcaagauuucuaacuugagugccagugucc
(((.(((((((.((((((((((((.(.(((((((((((((((.((((.((.......)).))))..))))))))))))))).).)))))))))))).)))))))))).

Structure
-   u       A            C A               -a    u  cc 
 ggc acugguA UCAAGUUAGGAA C UGCAAGUuguuuaug  guug gc  u
 ||| ||||||| |||||||||||| | |||||||||||||||  |||| ||  c
 cug ugaccgu aguucaaucuuu g acguucaguagauac  cgau cg  u
c   -       g            a a               cg    c  ug 


Annotation confidence Not enough data
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Genome context
Chr6: 26661349-26661456 [-]

Database links

Mature osa-miR5814

Accession MIMAT0023286
Description Oryza sativa osa-miR5814 mature miRNA
Sequence 11 - AAUCAAGUUAGGAACCAUGCAAGU - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22158467
    Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage
    "Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ"
    "Plant Cell (2011) 23:4185-4207