miRBase entry: osa-MIR5832

Stem-loop osa-MIR5832


Accession
MI0019852
Description
Oryza sativa osa-MIR5832 precursor miRNA


Sequence

caucaggaguugucaugccacauauccguccucacccugaccauuaguggagaggugcgcauUUGGCGGAGCGGUUGCUGUCAgcacugag
..((((..((((.((.((.((...(((((((.((((((..(((....))))).)))).).....))))))...)).)))).)))).)))).

Structure
ca    ga    u  u  c  aua      ----- u    -  ga   u 
  ucag  guug ca gc ac   uccguc     c cacc cu  cca u
  ||||  |||| || || ||   ||||||     | |||| ||  |||  
  aguc  cgAC GU CG UG   AGGCGG     g gugg ga  ggu a
-g    -a    U  -  U  GCG      UUuac c    a  --   g 


Annotation confidence Not enough data
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Genome context
Chr12: 21168996-21169086 [+]

Database links

Mature osa-miR5832

Accession MIMAT0023307
Description Oryza sativa osa-miR5832 mature miRNA
Sequence 63 - UUGGCGGAGCGGUUGCUGUCA - 83
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22158467
    Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage
    "Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ"
    "Plant Cell (2011) 23:4185-4207