Stem-loop osa-MIR5516b

Accession

MI0019859

Description

Oryza sativa osa-MIR5516b precursor miRNA

Gene family

MIPF0001595; MIR5516

Literature search

2 open access papers mention osa-MIR5516b
(3 sentences)

Sequence

ucucaguuuccgugggagugagaagcauggggaaauuuagcccuaCUCAUUGCUUCGGUAGGCUGGcga
..((((((((((.((.((((((.....(((((........))))))))))).)).))).)))))))...

Structure

-uc       -   u  g      aagca     aaa 
   ucaguuu ccg gg agugag     ugggg   u
   ||||||| ||| || ||||||     |||||    
   GGUCGGA GGC UC UUACUC     auccc   u
agc       U   U  G      -----     gau 

Annotation confidence Not enough data

Genome context

Chr5: 13962666-13962734 [-]

Mature osa-miR5516b

• Accession: MIMAT0023315
• Description: Oryza sativa osa-miR5516b mature miRNA
• Sequence: 46 - CUCAUUGCUUCGGUAGGCUGG - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22158467
   Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage
   "Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ"
   "Plant Cell (2011) 23:4185-4207