Stem-loop hco-mir-255

Accession

MI0020080

Description

Haemonchus contortus hco-mir-255 precursor miRNA

Gene family

MIPF0000368; mir-255

Sequence

guucggaugcgcuggaagacagguaggaaaucugguuaguuuuccgcaguucgcguaAAACUGAAAAGAUUUGUUACAGgaacuacaaaggaauggacaaggc
(((((..(.(..((.....(..((((.((((((..((((((((.(((.....))).))))))))..)))))).))))..).....))..).).))))).....

Structure

-----     ga g gc  gaaga ag    g      gg        c   a 
     guucg  u c  ug     c  guag aaaucu  uuaguuuu cgc g
     |||||  | |  ||     |  |||| ||||||  |||||||| ||| u
     caggu  a g  ac     g  CAUU UUUAGA  AGUCAAAa gcg u
cggaa     -a g aa  aucaa GA    G      AA        u   c 

Annotation confidence Not enough data

Genome context

Unknown

Mature hco-miR-255

• Accession: MIMAT0023411
• Description: Haemonchus contortus hco-miR-255 mature miRNA
• Sequence: 58 - AAACUGAAAAGAUUUGUUACAG - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4