Stem-loop hhv6b-mir-Ro6-4

Accession

MI0020182

Description

Human herpesvirus 6B hhv6b-mir-Ro6-4 precursor miRNA

Gene family

MIPF0001628; mir-Ro6-3

Sequence

gaccgagcggCGGAUGGAGCCCGCUCGGUCUCGcacguccgcgAUACCGAGCGGACUCCGUCGCCgcuccgg
..((((((((((.((((((.(((((((((.((((......)))).))))))))).))))))))))))).)))

Structure

ga   -       G      C         C    ac 
  ccg agcggCG AUGGAG CCGCUCGGU UCGc  g
  ||| ||||||| |||||| ||||||||| ||||   
  ggc ucgCCGC UGCCUC GGCGAGCCA Agcg  u
--   c       -      A         U    cc 

Annotation confidence Not enough data

Genome context

Unknown

Mature hhv6b-miR-Ro6-4-5p

• Accession: MIMAT0026462
• Description: Human herpesvirus 6B hhv6b-miR-Ro6-4-5p mature miRNA
• Sequence: 11 - CGGAUGGAGCCCGCUCGGUCUCG - 33
• Evidence: experimental ; cloned [1]

Mature hhv6b-miR-Ro6-4-3p

• Accession: MIMAT0026463
• Description: Human herpesvirus 6B hhv6b-miR-Ro6-4-3p mature miRNA
• Sequence: 44 - AUACCGAGCGGACUCCGUCGCC - 65
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 22114334
   Small RNA deep sequencing identifies microRNAs and other small noncoding RNAs from human herpesvirus 6B
   "Tuddenham L, Jung JS, Chane-Woon-Ming B, Dolken L, Pfeffer S"
   "J Virol (2012) 86:1638-1649