Stem-loop dpr-MIR156b

Accession

MI0020198

Description

Digitalis purpurea dpr-MIR156b precursor miRNA

Gene family

MIPF0000008; MIR156

Literature search

1 open access papers mention dpr-MIR156b
(3 sentences)

Sequence

agugUGACAGAAGAGAGUGAGCACacgcaggcuaauuguauacguguuuccuuuuguauacgugugcucacuugucuuucugucacaca
.(((((((((((((((((((((((((...........(((((((..........))))))))))))))))))).)).))))))))))).

Structure

a           -  -            gcaggcuaauu       uguu 
 gugUGACAGAA GA GAGUGAGCACac           guauacg    u
 ||||||||||| || ||||||||||||           |||||||     
 cacacugucuu cu uucacucgugug           cauaugu    c
a           u  g            -----------       uuuc 

Annotation confidence Not enough data

Genome context

Unknown

Mature dpr-miR156b

• Accession: MIMAT0023527
• Description: Digitalis purpurea dpr-miR156b mature miRNA
• Sequence: 5 - UGACAGAAGAGAGUGAGCAC - 24
• Evidence: not_experimental

References

1. PubMed ID: 22233149
   Comprehensive transcriptome analysis reveals novel genes involved in cardiac glycoside biosynthesis and mlncRNAs associated with secondary metabolism and stress response in Digitalis purpurea
   Wu B, Li Y, Yan H, Ma Y, Luo H, Yuan L, Chen S, Lu S
   BMC Genomics (2012) 13:15