Stem-loop dpr-MIR160

Accession

MI0020199

Description

Digitalis purpurea dpr-MIR160 precursor miRNA

Gene family

MIPF0000032; MIR160

Literature search

1 open access papers mention dpr-MIR160
(5 sentences)

Sequence

caUGCCUGGCUCCUUGUAUGCCAuucagcaaguacaucaauagcagguggccuuuguggauggcgugccaggagccaggcaua
.(((((((((((((.((((((((((((..(((..((((.......))))..)))..)))))))))))).))))))))))))).

Structure

c             U            gc   ua    aa 
 aUGCCUGGCUCCU GUAUGCCAuuca  aag  cauc  u
 ||||||||||||| ||||||||||||  |||  ||||  a
 uacggaccgagga cgugcgguaggu  uuc  gugg  g
a             c            gu   cg    ac 

Annotation confidence Not enough data

Genome context

Unknown

Mature dpr-miR160

• Accession: MIMAT0023528
• Description: Digitalis purpurea dpr-miR160 mature miRNA
• Sequence: 3 - UGCCUGGCUCCUUGUAUGCCA - 23
• Evidence: not_experimental

References

1. PubMed ID: 22233149
   Comprehensive transcriptome analysis reveals novel genes involved in cardiac glycoside biosynthesis and mlncRNAs associated with secondary metabolism and stress response in Digitalis purpurea
   Wu B, Li Y, Yan H, Ma Y, Luo H, Yuan L, Chen S, Lu S
   BMC Genomics (2012) 13:15