Stem-loop dpr-MIR166b

Accession

MI0020201

Description

Digitalis purpurea dpr-MIR166b precursor miRNA

Gene family

MIPF0000004; MIR166

Literature search

1 open access papers mention dpr-MIR166b
(3 sentences)

Sequence

uugaggggacuguugucuggccugaggccaccaacaagaucuauaugucaaaucuugaucuaaucuuuguaaucuaguuacaguuagaucauguguuagugacgUCGGACCAGGCUUCAUUCCCCccaa
.((.(((((.((..((((((.((((.(.(((.((((.(((......)))......(((((((((...((((((...)))))))))))))))..)))).))).).)))).))))))..)).))))).)).

Structure

u  a     c  uu      c    g c   c    agaucuauaugucaaaucu         cuu      c 
 ug gggga ug  gucugg cuga g cac aaca                   ugaucuaau   uguaau  
 || ||||| ||  |||||| |||| | ||| ||||                   |||||||||   |||||| u
 ac CCCCU AC  CGGACC GGCU c gug uugu                   acuagauug   acauug  
a  c     U  UU      A    g a   a    -----------------gu         ---      a 

Annotation confidence Not enough data

Genome context

Unknown

Mature dpr-miR166b

• Accession: MIMAT0023530
• Description: Digitalis purpurea dpr-miR166b mature miRNA
• Sequence: 105 - UCGGACCAGGCUUCAUUCCCC - 125
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 22233149
   Comprehensive transcriptome analysis reveals novel genes involved in cardiac glycoside biosynthesis and mlncRNAs associated with secondary metabolism and stress response in Digitalis purpurea
   Wu B, Li Y, Yan H, Ma Y, Luo H, Yuan L, Chen S, Lu S
   BMC Genomics (2012) 13:15