miRBase entry: ame-mir-2765

Stem-loop ame-mir-2765


Accession
MI0020216
Description
Apis mellifera ame-mir-2765 precursor miRNA
Gene family
MIPF0001008; mir-2765


Sequence

auuacugugucgaggauUGGUAACUCCACCACCGUUGGCggaaucuaauagcCAAUGGGGUACGAGUUUCCUUCucucggcgcgaaaug
.....(((((((((((..((.(((((.(((.((((((((...........)))))))))))..))))).)).)).))))))))).....

Structure
auuac         -  uU  U     -C   A        ggaa 
     ugugucgag ga  GG AACUC  ACC CCGUUGGC    u
     ||||||||| ||  || |||||  ||| ||||||||    c
     gcgcggcuc CU  CC UUGAG  UGG GGUAACcg    u
guaaa         u  -U  U     CA   -        auaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
CM000062.5: 5128388-5128476 [-]

Database links

Mature ame-miR-2765-5p

Accession MIMAT0023551
Description Apis mellifera ame-miR-2765-5p mature miRNA
Sequence 18 - UGGUAACUCCACCACCGUUGGC - 39
Evidence experimental
SOLiD [1], Illumina [3-5]

Mature ame-miR-2765-3p

Accession MIMAT0023552
Description Apis mellifera ame-miR-2765-3p mature miRNA
Sequence 53 - CAAUGGGGUACGAGUUUCCUUC - 74
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 20807255
    Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
    "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
    "Insect Mol Biol (2010) 19:799-805

  2. PubMed ID: 22458842
    Next-generation small RNA sequencing for microRNAs profiling in Apis mellifera: comparison between nurses and foragers
    "Liu F, Peng W, Li Z, Li W, Li L, Pan J, Zhang S, Miao Y, Chen S, Su S"
    "Insect Mol Biol (2012) 21:297-303

  3. PubMed ID: 22171334
    Detection of microRNAs in color space
    "Marco A, Griffiths-Jones S"
    "Bioinformatics (2012) 28:318-323

  4. PubMed ID: 22409512
    Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome
    "Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y"
    "Genes Brain Behav (2012) 11:660-670

  5. PubMed ID: 26853694
    MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)
    "Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL"
    "Insect Mol Biol (2016) 25:216-226