Stem-loop sequence sly-MIR482c

Accession MI0020251
Description Solanum lycopersicum miR482c stem-loop
Gene family MIPF0000403; MIR482
Stem-loop 
----   uu  g     g   u              -            -ua     u 
    gug  uc aggag ugu ggaguggguggugu gguaagauuuca   uuuau u
    |||  || ||||| ||| |||||||||||||| ||||||||||||   ||||| u
    uac  ag ucuuc gua ccuuacccgccaua ccguucuagagu   aaaua c
ucuu   -u  -     g   u              a            uaa     c
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Genome context
Coordinates (SL2.40) Overlapping transcripts
SL2.40ch06: 33877975-33878085 [-]
intergenic
Clustered miRNAs
< 10kb from sly-MIR482c
sly-MIR482c SL2.40ch06: 33877975-33878085 [-]
sly-MIR482b SL2.40ch06: 33870217-33870341 [-]

Mature sequence sly-miR482c

Accession MIMAT0023603
Sequence

70 -  

ucuugccaauaccgcccauucc

 - 91

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Evidence not experimental

References

1
PMID:22307647 "MicroRNA regulation of plant innate immune receptors" Li F, Pignatta D, Bendix C, Brunkard JO, Cohn MM, Tung J, Sun H, Kumar P, Baker B Proc Natl Acad Sci U S A. 109:1790-1795(2012).