miRBase entry: bna-MIR156g

Stem-loop bna-MIR156g


Accession
MI0020263
Description
Brassica napus bna-MIR156g precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
13 open access papers mention bna-MIR156g
(209 sentences)

Sequence

cguugauagugUUGACAGAAGAUAGAGAGCACagaugaugagaugcaauuuggagcagcuuguaugcaucguacuccuuugugcucucuagucuucugucaucacucguuacuug
...((((((((.(((((((((((((((((((((((.((((.((((((....((.....))....)))))).)).)).)))))))))))).))))))))))).)))).))))....

Structure
-cgu    -    U           -            u  -  a      auuu  a 
    ugau agug UGACAGAAGAU AGAGAGCACaga ga ug gaugca    gg g
    |||| |||| ||||||||||| |||||||||||| || || ||||||    || c
    auug ucac acugucuucug ucucucguguuu cu au cuacgu    uc a
guuc    c    u           a            c  c  g      augu  g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature bna-miR156g

Accession MIMAT0023616
Description Brassica napus bna-miR156g mature miRNA
Sequence 12 - UUGACAGAAGAUAGAGAGCAC - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22138974
    Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes
    "Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ"
    "Plant Physiol (2012) 158:813-823