Stem-loop bna-MIR160b

Accession

MI0020265

Description

Brassica napus bna-MIR160b precursor miRNA

Gene family

MIPF0000032; MIR160

Literature search

10 open access papers mention bna-MIR160b
(46 sentences)

Sequence

ucaUGCCUGGCUCCCUGUAUGCCAcaaguagauauugauuuugguugaaaaaaucagcugccaguggcguacaaggagucaagcauga
((((((.(((((((.((((((((((..((((...((((((((.......))))))))))))..)))))))))).))))))).))))))

Structure

      C       C          aa    aua        gg 
ucaUGC UGGCUCC UGUAUGCCAc  guag   uugauuuu  u
|||||| ||||||| ||||||||||  ||||   ||||||||  u
aguacg acugagg acaugcggug  cguc   gacuaaaa  g
      a       a          ac    ---        aa 

Annotation confidence Not enough data

Genome context

EM:AC189245: 14506-14593 [-]

Mature bna-miR160b

• Accession: MIMAT0023618
• Description: Brassica napus bna-miR160b mature miRNA
• Sequence: 4 - UGCCUGGCUCCCUGUAUGCCA - 24
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22138974
   Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes
   "Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ"
   "Plant Physiol (2012) 158:813-823