Stem-loop bna-MIR160d

Accession

MI0020267

Description

Brassica napus bna-MIR160d precursor miRNA

Gene family

MIPF0000032; MIR160

Literature search

10 open access papers mention bna-MIR160d
(46 sentences)

Sequence

gucaUGCCUGGCUCCCUGUAUGCCAcaaguaaauaccgaucucauuaugaaaucggacacuaguggcguacagaguagucaagcaugac
(((((((.((((((.(((((((((((.(((.....(((((.(((...))).)))))..))).))))))))))).).))))).)))))))

Structure

       C     - C           a   aaaua     c   u 
gucaUGC UGGCU C CUGUAUGCCAc agu     ccgau uca  
||||||| ||||| | ||||||||||| |||     ||||| ||| u
caguacg acuga g gacaugcggug uca     ggcua agu  
       a     u a           a   ---ca     a   a 

Annotation confidence Not enough data

Genome context

EM:AC183492: 98296-98384 [+]

Mature bna-miR160d

• Accession: MIMAT0023620
• Description: Brassica napus bna-miR160d mature miRNA
• Sequence: 5 - UGCCUGGCUCCCUGUAUGCCA - 25
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22138974
   Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes
   "Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ"
   "Plant Physiol (2012) 158:813-823