Stem-loop bna-MIR166e

Accession

MI0020273

Description

Brassica napus bna-MIR166e precursor miRNA

Gene family

MIPF0000004; MIR166

Literature search

9 open access papers mention bna-MIR166e
(35 sentences)

Sequence

uucuuuugaggggaauguugucuggcacgaggcccuuaacacagaucuacgaucgguuauauauauaauauaugaacgaucaauuuagugguugaugacgUCGGACCAGGCUUCAUUCCCCucaauuaca
.....((((((((((((..((((((..(((.(.(.(((((.((.......(((((.((((((((...)))))))).))))).......))))))).).).)))..))))))..)))))))))))).....

Structure

uucuu            uu      ca   g c c     a  gaucuac     g        a 
     uugaggggaaug  gucugg  cga g c uuaac ca       gaucg uuauauau  
     ||||||||||||  ||||||  ||| | | ||||| ||       ||||| |||||||| u
     aacuCCCCUUAC  CGGACC  GCU c g aguug gu       cuagc aguauaua  
acauu            UU      AG   g a u     -  gauuuaa     a        a 

Annotation confidence Not enough data

Genome context

Unknown

Mature bna-miR166e

• Accession: MIMAT0023626
• Description: Brassica napus bna-miR166e mature miRNA
• Sequence: 101 - UCGGACCAGGCUUCAUUCCCC - 121
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22138974
   Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes
   "Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ"
   "Plant Physiol (2012) 158:813-823