miRBase entry: bna-MIR167d

Stem-loop bna-MIR167d


Accession
MI0020274
Description
Brassica napus bna-MIR167d precursor miRNA
Gene family
MIPF0000023; MIR167_1

Literature search
9 open access papers mention bna-MIR167d
(32 sentences)

Sequence

uuuugggaggcUGAAGCUGCCAGCAUGAUCUguguauagauagugguaccagaucauccugcggcuucauucacucaaaucaccaacaau
.((((((.((.(((((((((.((.((((((((.((((........)))))))))))).))))))))))).)).))))))...........

Structure
----------u      a  c         C  C        u    aga 
           uuuggg gg UGAAGCUGC AG AUGAUCUg guau   u
           |||||| || ||||||||| || |||||||| ||||    
           aaacuc cu acuucggcg uc uacuagac caug   a
uaacaaccacu      a  u         -  c        -    gug 


Annotation confidence Not enough data
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Genome context
EM:DY023882: 199-288 [+]

Database links

Mature bna-miR167d

Accession MIMAT0023627
Description Brassica napus bna-miR167d mature miRNA
Sequence 12 - UGAAGCUGCCAGCAUGAUCU - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22138974
    Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes
    "Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ"
    "Plant Physiol (2012) 158:813-823