Stem-loop bna-MIR394a

Accession

MI0020281

Description

Brassica napus bna-MIR394a precursor miRNA

Gene family

MIPF0000100; MIR394

Literature search

4 open access papers mention bna-MIR394a
(100 sentences)

Sequence

acagaguucuUUGGCAUUCUGUCCACCUCCuuucugaauauauuuguguauaaguguacgcaacuacguuguguuuugugugaggaggugggcauacugccaauagagaucuguua
(((((.((((((((((...(((((((((((((.(.(((((((.((((((((....))))))))......)))))))...).)))))))))))))...)))))).)))).)))))..

Structure

--     g    -      UUC             u --u       -----u        a 
  acaga uucu UUGGCA   UGUCCACCUCCuu c   gaauaua      uuguguau a
  ||||| |||| ||||||   ||||||||||||| |   |||||||      ||||||||  
  ugucu gaga aaccgu   acggguggaggag g   uuugugu      aacgcaug g
au     a    u      cau             u ugu       ugcauc        u 

Annotation confidence Not enough data

Genome context

EM:AC189318: 31776-31891 [+]

Mature bna-miR394a

• Accession: MIMAT0023634
• Description: Brassica napus bna-miR394a mature miRNA
• Sequence: 11 - UUGGCAUUCUGUCCACCUCC - 30
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22138974
   Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes
   "Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ"
   "Plant Physiol (2012) 158:813-823