Stem-loop bna-MIR395f

Accession

MI0020288

Description

Brassica napus bna-MIR395f precursor miRNA

Gene family

MIPF0000016; MIR395

Literature search

6 open access papers mention bna-MIR395f
(18 sentences)

Sequence

guccucuugaguucccuuuaacgcuucauuguucagacuugguugucuaauaucuaccgauacaucaacguaaugaacaCUGAAGUGUUUGGGGGGACUCuagguggc
(((.(((.((((((((((.(((((((((.((((((.(((((((((((...........)))).))))).))..)))))).))))))))).)))))))))).))).)))

Structure

   c   u          u         u      -g  -     -    uaau 
guc ucu gaguucccuu aacgcuuca uguuca  ac uuggu uguc    a
||| ||| |||||||||| ||||||||| ||||||  || ||||| ||||    u
cgg gga CUCAGGGGGG UUGUGAAGU acaagu  ug aacua auag    c
   u   u          U         C      aa  c     c    ccau 

Annotation confidence Not enough data

Genome context

EM:BH944178: 47-154 [+]

Mature bna-miR395f

• Accession: MIMAT0023641
• Description: Brassica napus bna-miR395f mature miRNA
• Sequence: 80 - CUGAAGUGUUUGGGGGGACUC - 100
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22138974
   Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes
   "Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ"
   "Plant Physiol (2012) 158:813-823