Stem-loop bna-MIR399b

Accession

MI0020289

Description

Brassica napus bna-MIR399b precursor miRNA

Gene family

MIPF0000015; MIR399

Literature search

5 open access papers mention bna-MIR399b
(11 sentences)

Sequence

auuacagggcaagaucucuauuggcaggaaaccauuacuugaccuuugcaucucuuuaugcauuguuuuguagugaguucucUGCCAAAGGAGAUUUGCCCGGuaau
(((((.(((((.(((((((.((((((((.(((((((((..(((...(((((......)))))..)))..)))))).))).)))))))).)))))))))))).)))))

Structure

     a     a       a        a   -      uu   cuu     cu 
auuac gggca gaucucu uuggcagg aac cauuac  gac   ugcau  c
||||| ||||| ||||||| |||||||| ||| ||||||  |||   |||||   
uaauG CCCGU UUAGAGG AACCGUcu uug gugaug  uug   acgua  u
     G     -       A        c   a      uu   -uu     uu 

Annotation confidence Not enough data

Genome context

EM:AC189240: 96538-96644 [+]

Mature bna-miR399b

• Accession: MIMAT0023642
• Description: Brassica napus bna-miR399b mature miRNA
• Sequence: 83 - UGCCAAAGGAGAUUUGCCCGG - 103
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22138974
   Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes
   "Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ"
   "Plant Physiol (2012) 158:813-823