Stem-loop bna-MIR399c

Accession

MI0020290

Description

Brassica napus bna-MIR399c precursor miRNA

Gene family

MIPF0000015; MIR399

Literature search

5 open access papers mention bna-MIR399c
(11 sentences)

Sequence

auuacagggcaagaucuccuuuggcaggaauccauuacuucagucuuacauaugcauauauguuuguggugagcucucUGCCAAAGGAGAUUUGUCCGGuaau
(((((.(((((.(((((((((((((((((.....(((((.(((....((((((....))))))))).)))))..)).)))))))))))))))))))).)))))

Structure

     a     a               -  aucca     u   ucuu      g 
auuac gggca gaucuccuuuggcag ga     uuacu cag    acauau c
||||| ||||| ||||||||||||||| ||     ||||| |||    ||||||  
uaauG CCUGU UUAGAGGAAACCGUc cu     agugg guu    uguaua a
     G     -               u  ---cg     u   ----      u 

Annotation confidence Not enough data

Genome context

EM:BH538972: 179-281 [+]

Mature bna-miR399c

• Accession: MIMAT0023643
• Description: Brassica napus bna-miR399c mature miRNA
• Sequence: 79 - UGCCAAAGGAGAUUUGUCCGG - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22138974
   Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes
   "Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ"
   "Plant Physiol (2012) 158:813-823