Stem-loop bna-MIR403

Accession

MI0020291

Description

Brassica napus bna-MIR403 precursor miRNA

Gene family

MIPF0000290; MIR403

Literature search

3 open access papers mention bna-MIR403
(5 sentences)

Sequence

agagaagagucauauuacauguuuugugcgugaaucuaauucguaugcucauguaguaauccuaucuuguuguuggaUUAGAUUCACGCACAAACUCGuaaucugucuuuu
....(((((.((.(((((..((((.((((((((((((((((((...((....((((.....))))...))...))))))))))))))))))))))..))))).)).)))))

Structure

agag     u  u     au    u                  uau  ucau    u 
    aagag ca auuac  guuu gugcgugaaucuaauucg   gc    guag a
    ||||| || |||||  |||| ||||||||||||||||||   ||    |||| a
    uuuuc gu uaauG  CAAA CACGCACUUAGAUUaggu   ug    uauc u
----     u  c     CU    -                  ugu  -uuc    c 

Annotation confidence Not enough data

Genome context

EM:AC189416: 25604-25714 [+]

Mature bna-miR403

• Accession: MIMAT0023644
• Description: Brassica napus bna-miR403 mature miRNA
• Sequence: 78 - UUAGAUUCACGCACAAACUCG - 98
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22138974
   Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes
   "Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ"
   "Plant Physiol (2012) 158:813-823