miRBase entry: bna-MIR860

Stem-loop bna-MIR860


Accession
MI0020292
Description
Brassica napus bna-MIR860 precursor miRNA
Gene family
MIPF0001176; MIR860

Literature search
2 open access papers mention bna-MIR860
(4 sentences)

Sequence

uggucaaguguaauguauguaguccaaucuauugaaguacuagcacaccaucucuagugagaugaugugguugaguaguUCAAUACAUUGGACUACAUAUauuacuuuugaucaa
((((((((.(((((((((((((((((((.(((((((.((((..((((.((((((....)))))).))))....)))).))))))).))))))))))))))))))).)))))))).

Structure
-        u                   c       g    --ag    c      u 
 uggucaag guaauguauguaguccaau uauugaa uacu    caca caucuc a
 |||||||| ||||||||||||||||||| ||||||| ||||    |||| ||||||  
 acuaguuu cauuaUAUACAUCAGGUUA AUAACUu auga    gugu guagag g
a        u                   C       g    guug    a      u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
EM:CA991770: 133-247 [+]

Database links

Mature bna-miR860

Accession MIMAT0023645
Description Brassica napus bna-miR860 mature miRNA
Sequence 80 - UCAAUACAUUGGACUACAUAU - 100
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22138974
    Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes
    "Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ"
    "Plant Physiol (2012) 158:813-823