Stem-loop bna-MIR2111d

Accession

MI0020293

Description

Brassica napus bna-MIR2111d precursor miRNA

Gene family

MIPF0000754; MIR2111

Literature search

3 open access papers mention bna-MIR2111d
(3 sentences)

Sequence

gugaagaacuggUAAUCUGCAUCCUGAGGUUUAaaaauuuauaggcaauuaaaacaugcaaauguguguaugguuuuuuaauccucgggauacggauuaccucuuccuuacu
((((.(((..(((((((((.(((((((((.(((((((.(((((.((.......((((....)))))).))))).))))))).))))))))).)))))))))..))).)))).

Structure

-    a   cu         C         U       u     g  aauuaaa    g 
 guga gaa  ggUAAUCUG AUCCUGAGG UUAaaaa uuaua gc       acau c
 |||| |||  ||||||||| ||||||||| ||||||| ||||| ||       ||||  
 cauu cuu  ccauuaggc uagggcucc aauuuuu gguau ug       ugua a
u    c   cu         a         u       u     g  -------    a 

Annotation confidence Not enough data

Genome context

EM:AC189646: 4110-4221 [+]

Mature bna-miR2111d

• Accession: MIMAT0023646
• Description: Brassica napus bna-miR2111d mature miRNA
• Sequence: 13 - UAAUCUGCAUCCUGAGGUUUA - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22138974
   Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes
   "Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ"
   "Plant Physiol (2012) 158:813-823