miRBase entry: ame-mir-6043

Stem-loop ame-mir-6043


Accession
MI0020312
Description
Apis mellifera ame-mir-6043 precursor miRNA


Sequence

aauuccuuuugauagacgcguccaccauuguugcgcgcgacaAUGGUGACCGUGAUCUAUUCCAaaaugcugau
......((((((((((((((..(((((((((((....)))))))))))..)))).)))))..))))).......

Structure
-aauucc     --     -    uc           c 
       uuuug  auaga cgcg  caccauuguug g
       |||||  ||||| ||||  |||||||||||  
       aaaAC  UAUCU GUGC  GUGGUAacagc c
uagucgu     CU     A    CA           g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
CM000059.5: 3610944-3611017 [-]

Database links

Mature ame-miR-6043-3p

Accession MIMAT0023665
Description Apis mellifera ame-miR-6043-3p mature miRNA
Sequence 43 - AUGGUGACCGUGAUCUAUUCCA - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22458842
    Next-generation small RNA sequencing for microRNAs profiling in Apis mellifera: comparison between nurses and foragers
    "Liu F, Peng W, Li Z, Li W, Li L, Pan J, Zhang S, Miao Y, Chen S, Su S"
    "Insect Mol Biol (2012) 21:297-303